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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs79062472 chr18:37098093 C/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs7916086 chr10:61385006 G/A GAGE2D chrX:49207160-49214420:+ 0.59 8.42 2.77E-11 Box Plot
ACC rs79293003 chr3:56169819 A/T PRHOXNB chr13:28552243-28562774:- 0.69 8.6 1.45E-11 Box Plot
ACC rs7932933 chr11:126814332 A/G KRT6C chr12:52862300-52867569:- 0.94 7.66 4.4E-10 Box Plot
ACC rs79330550 chr11:8475947 G/A PRHOXNB chr13:28552243-28562774:- 0.63 7.53 7.08E-10 Box Plot
ACC rs79338045 chr2:174083667 T/G PRHOXNB chr13:28552243-28562774:- 0.55 8.06 1.03E-10 Box Plot
ACC rs79399248 chr14:97267589 A/T OR5V1 chr6:29323007-29399744:- 0.56 7.59 5.73E-10 Box Plot
ACC rs79421202 chr11:133297155 T/G OR5V1 chr6:29323007-29399744:- 0.72 8.84 6.19E-12 Box Plot
ACC rs79427392 chr7:17264957 T/C TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs794521 chr5:99703805 A/G C2orf57 chr2:232457575-232458994:+ -0.88 -7.62 5.03E-10 Box Plot
ACC rs79452216 chr6:150466066 G/A PRHOXNB chr13:28552243-28562774:- 0.6 7.54 6.87E-10 Box Plot
ACC rs79457867 chr5:120318130 C/T GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs794610 chr6:119276380 G/T ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs794612 chr6:119277489 T/G ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs794613 chr6:119278056 G/C ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot